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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC034855.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 169aa MW: 19147 Da PI: 10.051 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.2 | 4.4e-11 | 13 | 59 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE+ RRdr+N++f eL ++l + + +K +K++iL Av+ + +L EcC034855.10 13 KACREKLRRDRLNERFLELGSILEPG---RPPKTDKSAILSDAVRMVTQL 59 678**********************8...89**************99988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.925 | 8 | 59 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.4E-8 | 12 | 59 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.18E-7 | 12 | 64 | No hit | No description |
SMART | SM00353 | 8.2E-9 | 14 | 65 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 7.46E-14 | 14 | 84 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.3E-13 | 15 | 82 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009055 | Molecular Function | electron carrier activity | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence Send to blast |
RLKSESCLSS GSKACREKLR RDRLNERFLE LGSILEPGRP PKTDKSAILS DAVRMVTQLR 60 TEAQKLKESN EELQEKIKEL KAEKNELRDE KQRLKADKEK LEQQLKVSSF HPVFPPHPSV 120 VSTPFAAQER AGGNKLMPYI GFPGVAMWQF MPPSTVDTSQ DHVLRPPVA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010035617.1 | 1e-121 | PREDICTED: transcription factor ILR3-like | ||||
Swissprot | Q9FH37 | 6e-82 | ILR3_ARATH; Transcription factor ILR3 | ||||
TrEMBL | A0A059A151 | 1e-121 | A0A059A151_EUCGR; Uncharacterized protein | ||||
STRING | VIT_12s0059g02650.t01 | 1e-96 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 7e-78 | bHLH family protein |