PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC034855.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 169aa    MW: 19147 Da    PI: 10.051
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC034855.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.4e-111359554
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
           HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                  +  rE+ RRdr+N++f eL ++l +    + +K +K++iL  Av+ + +L
  EcC034855.10 13 KACREKLRRDRLNERFLELGSILEPG---RPPKTDKSAILSDAVRMVTQL 59
                  678**********************8...89**************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.925859IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-81259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.18E-71264No hitNo description
SMARTSM003538.2E-91465IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.46E-141484IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-131582IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009055Molecular Functionelectron carrier activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
RLKSESCLSS GSKACREKLR RDRLNERFLE LGSILEPGRP PKTDKSAILS DAVRMVTQLR  60
TEAQKLKESN EELQEKIKEL KAEKNELRDE KQRLKADKEK LEQQLKVSSF HPVFPPHPSV  120
VSTPFAAQER AGGNKLMPYI GFPGVAMWQF MPPSTVDTSQ DHVLRPPVA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010035617.11e-121PREDICTED: transcription factor ILR3-like
SwissprotQ9FH376e-82ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A059A1511e-121A0A059A151_EUCGR; Uncharacterized protein
STRINGVIT_12s0059g02650.t011e-96(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.17e-78bHLH family protein